Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechloromonas agitata is5 (GCF_000519045.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechloromonas agitata is5, or try another query

thrC K420_RS0113725 WP_027458570.1: threonine synthase
is similar to:
PaperBLAST

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

70% id,
99% cov

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

56% id,
99% cov

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

42% id,
99% cov

More...

ilvA K420_RS0104965 WP_027457085.1: threonine ammonia-lyase, biosynthetic
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

28% id,
83% cov

K420_RS0106755 WP_027457405.1: TrpB-like pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

26% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory