Curated BLAST for Genomes

 

Curated BLAST

Searching in Aquimarina macrocephali JAMB N27 (GCF_000520995.1)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.82' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Aquimarina macrocephali JAMB N27, or try another query

Z054_RS0116790 WP_024771205.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

35% id,
86% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

29% id,
88% cov

Z054_RS0117465 WP_024771333.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

36% id,
82% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

27% id,
53% cov

Z054_RS0107025 WP_024769372.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

32% id,
89% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

32% id,
84% cov

rocD Z054_RS0124165 WP_024772593.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

34% id,
81% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

33% id,
52% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

29% id,
28% cov

bioA Z054_RS0101370 WP_024768310.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

28% id,
95% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

29% id,
81% cov

Z054_RS0102190 WP_316929913.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

29% id,
91% cov

hemL Z054_RS0120100 WP_024771832.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

30% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory