Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

HALAL_RS0113465 WP_029767971.1: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

LEU3_MYCTU / P9WKK9: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis

65% id,
99% cov

P94929: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis

65% id,
99% cov

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

47% id,
85% cov

More...

HALAL_RS0102630 WP_025272513.1: tartrate dehydrogenase
is similar to:
PaperBLAST

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

55% id,
99% cov

LEU3_MYCTU / P9WKK9: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis

45% id,
100% cov

P94929: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis

45% id,
100% cov

More...

HALAL_RS0102990 WP_025272581.1: NADP-dependent isocitrate dehydrogenase
is similar to:
PaperBLAST

Q8E9N3: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis

29% id,
54% cov

D2YZL2: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica

27% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory