Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

metH HALAL_RS0113755 WP_245598118.1: methionine synthase
is similar to:
PaperBLAST

metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum

60% id,
99% cov

DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris

32% id,
100% cov

DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris

32% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory