Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 9 curated entries in PaperBLAST's database that match '2.6.1.6' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

HALAL_RS0113470 WP_025274501.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis

47% id,
92% cov

ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis

46% id,
94% cov

BAT1 / P38891: branched-chain amino acid aminotransferase subunit (EC 2.6.1.42; EC 2.6.1.6) from Saccharomyces cerevisiae

40% id,
92% cov

More...

HALAL_RS0104840 WP_025272919.1: aminotransferase class IV
is similar to:
PaperBLAST

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus

28% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory