Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

thrB HALAL_RS0109865 WP_025273852.1: homoserine kinase
is similar to:
PaperBLAST

P07128: homoserine kinase (EC 2.7.1.39) from Corynebacterium glutamicum

43% id,
94% cov

KHSE_METMP / Q6M0H5: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Methanococcus maripaludis

32% id,
97% cov

Q4Q6Y2: homoserine kinase (EC 2.7.1.39) from Leishmania major

35% id,
76% cov

More...

aroB HALAL_RS0114995 WP_025274781.1: 3-dehydroquinate synthase
is similar to:
PaperBLAST

thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris
DvMF_0971: Homoserine kinase (EC:2.7.1.39) from Desulfovibrio vulgaris

31% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory