Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 43 curated entries in PaperBLAST's database that match '5.3.1.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

araA HALAL_RS0102135 WP_025272425.1: L-arabinose isomerase
is similar to:
PaperBLAST

A0LT86: L-arabinose isomerase (EC 5.3.1.4) from Acidothermus cellulolyticus

60% id,
95% cov

H6UGW9: L-arabinose isomerase (EC 5.3.1.4) from Arthrobacter sp.

57% id,
98% cov

ARAA_GEOSE / Q9S467: L-arabinose isomerase; EC 5.3.1.4 from Geobacillus stearothermophilus
Q9S467: L-arabinose isomerase (EC 5.3.1.4) from Geobacillus stearothermophilus

56% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory