Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloglycomyces albus DSM 45210 (GCF_000527155.1)

Found 29 curated entries in PaperBLAST's database that match 'sorbitol dehydrogenase' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Haloglycomyces albus DSM 45210, or try another query

fabG HALAL_RS0101795 WP_025272362.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

34% id,
95% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

31% id,
95% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

31% id,
95% cov

More...

HALAL_RS0108330 WP_025273560.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

33% id,
96% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

32% id,
98% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
98% cov

More...

HALAL_RS0100575 WP_025272126.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

31% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

31% id,
99% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

30% id,
99% cov

More...

HALAL_RS0109615 WP_025273805.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

31% id,
96% cov

fabG HALAL_RS0113050 WP_025274425.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

30% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

27% id,
98% cov

hcaB HALAL_RS0115385 WP_025274852.1: 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

29% id,
98% cov

HALAL_RS0112835 WP_025274383.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

27% id,
99% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

26% id,
99% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

25% id,
99% cov

More...

HALAL_RS0101835 WP_025272370.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

25% id,
99% cov

HALAL_RS0110700 WP_025274003.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

34% id,
72% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

32% id,
72% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

31% id,
72% cov

More...

HALAL_RS0111060 WP_084471966.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
87% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

24% id,
93% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

28% id,
77% cov

More...

HALAL_RS0106325 WP_025273198.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

27% id,
88% cov

NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica

27% id,
86% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

29% id,
72% cov

More...

HALAL_RS0114245 WP_025274641.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

31% id,
77% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

27% id,
89% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

31% id,
74% cov

More...

HALAL_RS16930 WP_035534513.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

1e3jA / O96496: Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly

23% id,
95% cov

HALAL_RS0102560 WP_025272500.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase

26% id,
79% cov

HALAL_RS0112495 WP_025274323.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

27% id,
71% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

24% id,
71% cov

HALAL_RS0115160 WP_025274811.1: NADP-dependent oxidoreductase
is similar to:
PaperBLAST

DHSO_SCHPO / P36624: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Protein tms1; EC 1.1.1.- from Schizosaccharomyces pombe

26% id,
48% cov

HALAL_RS0112035 WP_025274246.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

36% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory