Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyadobacter tibetensis Y620-1 (GCF_000566685.1)

Found 1 curated entries in PaperBLAST's database that match '1.5.99.8' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dyadobacter tibetensis Y620-1, or try another query

pruA X939_RS0120545 WP_025765157.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
35% cov

X939_RS0103685 WP_025761916.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
34% cov

aldA X939_RS0100145 WP_025761200.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
34% cov

X939_RS0104800 WP_025762132.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

29% id,
32% cov

X939_RS0111255 WP_025763371.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

30% id,
31% cov

X939_RS0105455 WP_044198645.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

27% id,
33% cov

X939_RS0101650 WP_025761520.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

26% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory