Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyadobacter tibetensis Y620-1 (GCF_000566685.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dyadobacter tibetensis Y620-1, or try another query

rocD X939_RS0120435 WP_025765140.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

59% id,
99% cov

Q3ZCF5: ornithine aminotransferase (EC 2.6.1.13) from Bos taurus

62% id,
92% cov

Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis

62% id,
91% cov

More...

X939_RS0102485 WP_025761698.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

37% id,
95% cov

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

32% id,
94% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

32% id,
94% cov

More...

X939_RS0119365 WP_025764940.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii

36% id,
94% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

32% id,
91% cov

OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe
car2 / RF|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe

30% id,
96% cov

More...

X939_RS0110060 WP_025763135.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

36% id,
92% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

33% id,
92% cov

OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum
Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum

30% id,
94% cov

More...

hemL X939_RS0101775 WP_025761548.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
91% cov

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

31% id,
74% cov

ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii

29% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory