Curated BLAST for Genomes

 

Curated BLAST

Searching in Skermanella stibiiresistens SB22 (GCF_000576635.1)

Found 23 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 26 relevant proteins in Skermanella stibiiresistens SB22, or try another query

N825_RS07075 N825_27495 WP_037448983.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
yiaY / P37686: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli

39% id,
98% cov

N825_RS34055 N825_22390 WP_037461509.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
yiaY / P37686: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli

36% id,
91% cov

N825_RS07515 N825_27945 WP_037449134.1: L-idonate 5-dehydrogenase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

33% id,
97% cov

PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens

31% id,
98% cov

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

31% id,
98% cov

More...

N825_RS28175 N825_21085 WP_037459296.1: L-idonate 5-dehydrogenase
is similar to:
PaperBLAST

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

31% id,
100% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

32% id,
96% cov

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

31% id,
98% cov

More...

N825_RS26665 N825_17395 WP_037458740.1: 2,3-butanediol dehydrogenase
is similar to:
PaperBLAST

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

33% id,
94% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

33% id,
94% cov

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

32% id,
96% cov

More...

N825_RS20320 N825_10890 WP_037456232.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

E5RQ20: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Cupriavidus necator

31% id,
98% cov

D6PBM7: L-threonine 3-dehydrogenase (EC 1.1.1.103) from uncultured archaeon

28% id,
98% cov

E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii

27% id,
93% cov

More...

N825_RS21625 N825_12660 WP_037456814.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

32% id,
93% cov

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

32% id,
92% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

31% id,
93% cov

More...

N825_RS01535 N825_01605 WP_037446036.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis

29% id,
99% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

34% id,
72% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

34% id,
72% cov

More...

N825_RS26300 N825_17025 WP_037458653.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

30% id,
97% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

30% id,
97% cov

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

30% id,
96% cov

More...

N825_RS26340 N825_17065 WP_037458670.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

30% id,
97% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

29% id,
97% cov

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

28% id,
96% cov

More...

N825_RS19135 N825_08680 WP_037455522.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:
PaperBLAST

O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis

30% id,
94% cov

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

28% id,
100% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

31% id,
89% cov

More...

N825_RS12505 N825_36270 WP_037451943.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

28% id,
99% cov

PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens

38% id,
25% cov

N825_RS23790 N825_14930 WP_157619507.1: NAD(P)H-quinone oxidoreductase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

28% id,
99% cov

N825_RS10905 N825_33955 WP_037450886.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

E5RQ20: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Cupriavidus necator

31% id,
90% cov

RR42_RS28300: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Cupriavidus basilensis

29% id,
94% cov

Q7YW97: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Trypanosoma brucei

28% id,
92% cov

More...

N825_RS19070 N825_08615 WP_037455497.1: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

29% id,
94% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

28% id,
94% cov

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

27% id,
95% cov

More...

N825_RS08945 N825_30925 WP_037449883.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

25% id,
99% cov

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

23% id,
99% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

28% id,
78% cov

More...

denD N825_RS02820 N825_18260 WP_037446781.1: D-erythronate dehydrogenase
is similar to:
PaperBLAST

Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium

25% id,
96% cov

N825_RS15050 N825_04255 WP_037453305.1: zinc-binding alcohol dehydrogenase family protein
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

24% id,
97% cov

denD N825_RS23030 N825_14150 WP_037457558.1: D-erythronate dehydrogenase
is similar to:
PaperBLAST

Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium

23% id,
98% cov

N825_RS10855 N825_33905 WP_037451112.1: maleylacetate reductase
is similar to:
PaperBLAST

YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
yiaY / P37686: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli

29% id,
77% cov

N825_RS15095 N825_04300 WP_037453331.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RR42_RS28300: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Cupriavidus basilensis

29% id,
51% cov

N825_RS07325 N825_27755 WP_037449077.1: NAD-dependent epimerase/dehydratase family protein
is similar to:
PaperBLAST

Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium

27% id,
52% cov

N825_RS12230 N825_35715 WP_037451582.1: zinc-binding alcohol dehydrogenase
is similar to:
PaperBLAST

PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens

32% id,
39% cov

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

28% id,
35% cov

N825_RS05870 N825_24300 WP_037448221.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

41% id,
25% cov

N825_RS13415 N825_37190 WP_037452303.1: quinone oxidoreductase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

41% id,
22% cov

N825_RS01950 N825_02030 WP_037446089.1: sarcosine oxidase subunit alpha
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

36% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 25 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory