Curated BLAST for Genomes

 

Curated BLAST

Searching in Skermanella stibiiresistens SB22 (GCF_000576635.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Skermanella stibiiresistens SB22, or try another query

glmS N825_RS29855 N825_23205 WP_037459887.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

30% id,
97% cov

Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis

30% id,
99% cov

Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis

30% id,
97% cov

More...

N825_RS10625 N825_33660 WP_037450795.1: SIS domain-containing protein
is similar to:
PaperBLAST

Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis

28% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory