Curated BLAST for Genomes

 

Curated BLAST

Searching in Snodgrassella alvi wkB2 (GCF_000600005.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Snodgrassella alvi wkB2, or try another query

SALWKB2_RS02760 SALWKB2_0534 WP_025330160.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

PS417_17720: xylitol 2-dehydrogenase (EC 1.1.1.9) from Pseudomonas simiae

31% id,
96% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

29% id,
97% cov

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

27% id,
98% cov

More...

SALWKB2_RS07905 SALWKB2_1560 WP_025331133.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
97% cov

XYL2_ASPOR / Q86ZV0: D-xylulose reductase A; Xylitol dehydrogenase A; EC 1.1.1.9 from Aspergillus oryzae
GI|83774265: xylitol dehydrogenase; EC 1.1.1.9 from Aspergillus oryzae
xdhA / Q86ZV0: NAD+-dependent xylitol dehydrogenase (EC 1.1.1.9) from Aspergillus oryzae
Q86ZV0: D-xylulose reductase (EC 1.1.1.9) from Aspergillus oryzae

30% id,
96% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

29% id,
98% cov

More...

SALWKB2_RS03265 SALWKB2_0639 WP_025330258.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
97% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

27% id,
95% cov

G3AIP8: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

26% id,
95% cov

More...

SALWKB2_RS10565 SALWKB2_2103 WP_025331646.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

30% id,
95% cov

XYL2_YEAST / Q07993: D-xylulose reductase; Xylitol dehydrogenase; XDH; EC 1.1.1.9 from Saccharomyces cerevisiae
Q07993: D-xylulose reductase (EC 1.1.1.9) from Saccharomyces cerevisiae

28% id,
97% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

29% id,
92% cov

More...

fabG SALWKB2_RS08960 SALWKB2_1779 WP_025331338.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

27% id,
100% cov

adhP SALWKB2_RS03460 SALWKB2_0677 WP_025330295.1: alcohol dehydrogenase AdhP
is similar to:
PaperBLAST

xdhA / Q5GN51: D-xylulose reductase (EC 1.1.1.9) from Aspergillus niger

29% id,
92% cov

Q6KAV2: D-xylulose reductase (EC 1.1.1.9) from Blastobotrys adeninivorans

28% id,
93% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

27% id,
94% cov

More...

SALWKB2_RS00330 SALWKB2_0064 WP_025329716.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

26% id,
99% cov

SALWKB2_RS10225 SALWKB2_2023 WP_025331579.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

23% id,
97% cov

SALWKB2_RS10430 SALWKB2_2072 WP_025331620.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
70% cov

SALWKB2_RS08725 SALWKB2_1731 WP_025331293.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory