Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurihydrogenibium subterraneum DSM 15120 (GCF_000619805.1)

Found 162 curated entries in PaperBLAST's database that match '1.1.1.1' as complete word(s).

These curated entries have 134 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Sulfurihydrogenibium subterraneum DSM 15120, or try another query

Q385_RS0105415 WP_028950691.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

P42328: alcohol dehydrogenase (EC 1.1.1.1) from Geobacillus stearothermophilus

33% id,
99% cov

Q6RS93: alcohol dehydrogenase (EC 1.1.1.1) from Parageobacillus thermoglucosidasius

32% id,
99% cov

Q9HIM3: alcohol dehydrogenase (EC 1.1.1.1) from Thermoplasma acidophilum

29% id,
99% cov

More...

fabG Q385_RS0108495 WP_028951255.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

32% id,
97% cov

A0A075B5H4: alcohol dehydrogenase (EC 1.1.1.1) from Sphingomonas sp.

32% id,
98% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

33% id,
94% cov

More...

Q385_RS0104835 WP_028950582.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADH4_YEAST / P10127: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; ADHIV; EC 1.1.1.1 from Saccharomyces cerevisiae
ADH4 / P10127: alcohol dehydrogenase IV (EC 1.1.1.1) from Saccharomyces cerevisiae

28% id,
97% cov

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

27% id,
95% cov

gbsB: alcohol dehydrogenase; EC 1.1.1.1 from Bacillus subtilis

30% id,
85% cov

More...

Q385_RS0105845 WP_028950770.1: SDR family oxidoreductase
is similar to:
PaperBLAST

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

30% id,
92% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

29% id,
90% cov

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

27% id,
98% cov

More...

Q385_RS0104785 WP_028950574.1: enoyl-ACP reductase
is similar to:
PaperBLAST

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

30% id,
90% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

26% id,
94% cov

Q385_RS0106445 WP_028950880.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

23% id,
45% cov

Q385_RS0102785 WP_028950205.1: aldo/keto reductase
is similar to:
PaperBLAST

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

35% id,
27% cov

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

32% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

26158-26946 (frame +1) on NZ_JHUV01000011.1 Sulfurihydrogenibium subterraneum DSM 15120 Q385DRAFT_scaffold00004.4_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ASQE_EMENI / Q5AR48: Short chain dehydrogenase asqE; 4'-methoxyviridicatin/aspoquinolone biosynthesis cluster protein asqE; Aspoquinolone biosynthesis protein E; EC 1.1.1.1 from Emericella nidulans
Also see hits to annotated proteins above

30% id,
96% cov

385576-386610 (frame +1) on NZ_JHUV01000008.1 Sulfurihydrogenibium subterraneum DSM 15120 Q385DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis
Also see hits to annotated proteins above

35% id,
32% cov

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus
Also see hits to annotated proteins above

33% id,
32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory