Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurihydrogenibium subterraneum DSM 15120 (GCF_000619805.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfurihydrogenibium subterraneum DSM 15120, or try another query

Q385_RS0103845 WP_028950398.1: beta-ketoacyl-ACP synthase III
is similar to:
PaperBLAST

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

27% id,
34% cov

fabF Q385_RS0108505 WP_028951256.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

25% id,
30% cov

Msed_0656 / A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Metallosphaera sedula

27% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory