Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurihydrogenibium subterraneum DSM 15120 (GCF_000619805.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfurihydrogenibium subterraneum DSM 15120, or try another query

Q385_RS0105980 WP_028950797.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

60% id,
98% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

52% id,
100% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

47% id,
99% cov

guaA Q385_RS0107710 WP_028951110.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

30% id,
98% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
94% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

26% id,
94% cov

carA Q385_RS0105715 WP_028950746.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

29% id,
84% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

31% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory