Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 27 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0109205 WP_028489032.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

77% id,
100% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

28% id,
86% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

29% id,
82% cov

More...

Q394_RS0117950 WP_028490463.1: pteridine reductase
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

36% id,
100% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

35% id,
100% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

35% id,
100% cov

Q394_RS0118475 WP_211248857.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

36% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

36% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

35% id,
98% cov

More...

fabG Q394_RS0114510 WP_038141668.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

37% id,
94% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

33% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
99% cov

More...

phbB Q394_RS0118415 WP_028490539.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

34% id,
95% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
92% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
98% cov

More...

Q394_RS0112065 WP_038141396.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
94% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
98% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

28% id,
97% cov

Q394_RS0112895 WP_028489639.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
92% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

32% id,
97% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

30% id,
94% cov

More...

Q394_RS0109200 WP_028489031.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

Q9KWR5: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

35% id,
81% cov

Q394_RS0116370 WP_028490204.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
83% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

33% id,
82% cov

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

28% id,
89% cov

More...

Q394_RS0108165 WP_028488848.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

24% id,
94% cov

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

25% id,
80% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
70% cov

Q394_RS0103345 WP_028488026.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
71% cov

Q394_RS0104545 WP_028488230.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

27% id,
71% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

30% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory