Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)
Found 51 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).
These curated entries have 41 distinct sequences.
Running ublast with E ≤ 0.01
Found 13 relevant proteins in Thiothrix lacustris DSM 21227, or try another query
| thiO Q394_RS0106295 WP_028488529.1: glycine oxidase ThiO is similar to: | PaperBLAST |
O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 24% id, 99% cov |
Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 27% id, 57% cov |
Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis | 27% id, 53% cov |
| lpdA Q394_RS0108515 WP_028488916.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 25% id, 85% cov |
| mnmC Q394_RS20905 WP_051543524.1: FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC is similar to: | PaperBLAST |
O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 21% id, 88% cov |
Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis | 28% id, 45% cov |
Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 31% id, 27% cov |
| lpdA Q394_RS0102870 WP_028487951.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 24% id, 75% cov |
| lpdA Q394_RS0106590 WP_028488581.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 25% id, 66% cov |
| Q394_RS0111975 WP_028489491.1: 2-hydroxymuconic semialdehyde dehydrogenase is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 31% id, 44% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 30% id, 44% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 30% id, 44% cov |
| Q394_RS0117580 WP_028490397.1: succinate-semialdehyde dehydrogenase is similar to: | PaperBLAST |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 30% id, 45% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 28% id, 44% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 29% id, 43% cov |
| Q394_RS0104930 WP_028488290.1: aldehyde dehydrogenase family protein is similar to: | PaperBLAST |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 28% id, 44% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 28% id, 44% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 27% id, 46% cov |
| mnmG Q394_RS0110290 WP_028489223.1: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 25% id, 24% cov |
| Q394_RS0101140 WP_028487662.1: TIGR03862 family flavoprotein is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 40% id, 13% cov |
| Q394_RS0108225 WP_038140936.1: NAD(P)-binding protein is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 38% id, 13% cov |
| Q394_RS0101845 WP_028487779.1: FAD-binding protein is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 39% id, 12% cov |
| Q394_RS0104740 WP_028488259.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 41% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 108551-110308 (frame +2) on NZ_JHYQ01000015.1 Thiothrix lacustris DSM 21227 Q394DRAFT_scaffold00012.12_C, whole genome shotgun sequence is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 24% id, 96% cov |
| 104844-106376 (frame -3) on NZ_JHYQ01000007.1 Thiothrix lacustris DSM 21227 Q394DRAFT_scaffold00006.6_C, whole genome shotgun sequence is similar to: | PaperBLAST |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 27% id, 46% cov |
Lawrence Berkeley National Laboratory