Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 64 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0118420 WP_028490540.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

79% id,
100% cov

THIL_THIVI / P45363: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Thiocystis violacea

77% id,
100% cov

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator
P14611: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

70% id,
99% cov

More...

Q394_RS0100445 WP_028487541.1: acetyl-CoA C-acyltransferase family protein
is similar to:
PaperBLAST

PfGW456L13_2411: Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens

57% id,
99% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

55% id,
100% cov

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

50% id,
99% cov

More...

Q394_RS0112855 WP_028489633.1: thiolase family protein
is similar to:
PaperBLAST

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

46% id,
99% cov

PGA1_c03400: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Phaeobacter inhibens

43% id,
99% cov

THIL_RHIME / P50174: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Rhizobium meliloti
SMc03879: Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Sinorhizobium meliloti

42% id,
99% cov

More...

Q394_RS0100040 WP_028487472.1: beta-ketoacyl-ACP synthase III
is similar to:
PaperBLAST

ERG10_CANAL / A0A1D8PH52: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Candida albicans

30% id,
32% cov

fabF Q394_RS0114520 WP_028489902.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

27% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory