Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 18 curated entries in PaperBLAST's database that match '2.4.1.20' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0103990 WP_028488141.1: glucoamylase family protein
is similar to:
PaperBLAST

AAB95491.2: cellobiose-phosphorylase (CbpA) (EC 2.4.1.20)

31% id,
100% cov

CBPA_THENN / B9K7M6: Cellobiose phosphorylase; EC 2.4.1.20 from Thermotoga neapolitana

30% id,
100% cov

CAB16926.1: cellobiose-phosphorylase (CepA) (EC 2.4.1.20)

30% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory