Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0110920 WP_028489329.1: branched-chain amino acid transaminase is similar to:	PaperBLAST
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	69% id, 100% cov
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	68% id, 100% cov
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	66% id, 100% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	51% id, 99% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	49% id, 97% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	45% id, 99% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	46% id, 95% cov
N515DRAFT_2015: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica	45% id, 97% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	40% id, 96% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	40% id, 96% cov
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	40% id, 95% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	40% id, 93% cov
D1CCW1: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermobaculum terrenum	38% id, 97% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	38% id, 96% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	38% id, 92% cov
A6UP94: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus vannielii	35% id, 99% cov
D0LR31: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Haliangium ochraceum	33% id, 94% cov
ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis	33% id, 90% cov
Q0E9S8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Helicobacter pylori	32% id, 91% cov
A0A2Z4MEX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Brevibacillus brevis	32% id, 90% cov
O26004: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Helicobacter pylori	31% id, 91% cov
A0A5Q8BPF5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Lacticaseibacillus paracasei	30% id, 92% cov
Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans	33% id, 82% cov
RR42_RS25890: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Cupriavidus basilensis	30% id, 89% cov
ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis	31% id, 86% cov
Q8DTW7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Streptococcus mutans	28% id, 92% cov
Q7BPX6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Lactococcus lactis	28% id, 92% cov
ILVE_MYCTU / P9WQ75: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycobacterium tuberculosis P9WQ75: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycobacterium tuberculosis	29% id, 89% cov
ILVE_MYCS2 / A0R066: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycolicibacterium smegmatis A0R066: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycolicibacterium smegmatis	29% id, 86% cov
Q9LPM9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	27% id, 87% cov
Q9LE06: branched-chain-amino-acid transaminase (EC 2.6.1.42); methionine transaminase (EC 2.6.1.88) from Arabidopsis thaliana	27% id, 87% cov
eca39 / RF\|NP_595180.1: branched chain amino acid aminotransferase Eca39; EC 2.6.1.42 from Schizosaccharomyces pombe	27% id, 84% cov
A0A0A0KG15: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	30% id, 77% cov
Q93Y32: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	28% id, 82% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	29% id, 78% cov
Q9FYA6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	30% id, 74% cov
BCAT2_ARATH / Q9M439: Branched-chain-amino-acid aminotransferase 2, chloroplastic; Atbcat-2; EC 2.6.1.42 from Arabidopsis thaliana Q9M439: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	28% id, 80% cov
Q70KX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Hordeum vulgare	29% id, 77% cov
BCAT3_ARATH / Q9M401: Branched-chain-amino-acid aminotransferase 3, chloroplastic; Atbcat-3; EC 2.6.1.42; EC 2.6.1.88 from Arabidopsis thaliana Q9M401: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	30% id, 73% cov
BCA1_SCHPO / O14370: Branched-chain-amino-acid aminotransferase, mitochondrial; BCAT; EC 2.6.1.42 from Schizosaccharomyces pombe O14370: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Schizosaccharomyces pombe	27% id, 75% cov
BCAT2_HUMLU / K7QHS5: Branched-chain amino acid aminotransferase 2, chloroplastic; HlBCAT2; EC 2.6.1.42 from Humulus lupulus	34% id, 37% cov
B6RFK8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Nicotiana benthamiana	34% id, 37% cov
More...

pabC Q394_RS0114530 WP_028489904.1: aminodeoxychorismate lyase is similar to:	PaperBLAST
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	30% id, 90% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	30% id, 88% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	30% id, 88% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	27% id, 81% cov
More...

alaC Q394_RS0109350 WP_028489058.1: alanine transaminase is similar to:	PaperBLAST
BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis	27% id, 77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

45885-47054 (frame +3) on NZ_JHYQ01000017.1 Thiothrix lacustris DSM 21227 Q394DRAFT_scaffold00014.14_C, whole genome shotgun sequence is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.	25% id, 91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory