Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0113995 WP_028489816.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

41% id,
96% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

40% id,
97% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

39% id,
97% cov

More...

bioA Q394_RS0111125 WP_028489358.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis

31% id,
96% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

29% id,
94% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

30% id,
91% cov

More...

hemL Q394_RS0104770 WP_028488265.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

32% id,
77% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

29% id,
83% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

30% id,
80% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory