Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Thiothrix lacustris DSM 21227, or try another query
| Q394_RS0111245 WP_028489373.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 31% id, 82% cov |
| ispE Q394_RS0101230 WP_211248775.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 24% id, 49% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 59771-60961 (frame +2) on NZ_JHYQ01000008.1 Thiothrix lacustris DSM 21227 Q394DRAFT_scaffold00007.7_C, whole genome shotgun sequence is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 43% id, 98% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 34% id, 97% cov |
Lawrence Berkeley National Laboratory