Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)
Found 13 curated entries in PaperBLAST's database that match '4.1.2.19' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Thiothrix lacustris DSM 21227, or try another query
| Q394_RS0118475 WP_211248857.1: glucose 1-dehydrogenase is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 32% id, 38% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 31% id, 37% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 29% id, 38% cov |
| fabG Q394_RS0114510 WP_038141668.1: 3-oxoacyl-ACP reductase FabG is similar to: | PaperBLAST |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 29% id, 38% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 29% id, 37% cov |
| Q394_RS0117950 WP_028490463.1: pteridine reductase is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 29% id, 37% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 26% id, 38% cov |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 24% id, 32% cov |
| Q394_RS0112895 WP_028489639.1: SDR family oxidoreductase is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 28% id, 38% cov |
| phbB Q394_RS0118415 WP_028490539.1: acetoacetyl-CoA reductase is similar to: | PaperBLAST |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 28% id, 38% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 27% id, 37% cov |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 26% id, 37% cov |
| Q394_RS0112065 WP_038141396.1: SDR family oxidoreductase is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 25% id, 37% cov |
| Q394_RS0109205 WP_028489032.1: SDR family oxidoreductase is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 26% id, 35% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 26% id, 34% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 24% id, 31% cov |
| Q394_RS0108165 WP_028488848.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 25% id, 31% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 27% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 64550-65344 (frame +2) on NZ_KK211258.1 Thiothrix lacustris DSM 21227 Q394DRAFT_scaffold00008.8, whole genome shotgun sequence is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 29% id, 39% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 28% id, 39% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 26% id, 40% cov |
Lawrence Berkeley National Laboratory