Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 16 curated entries in PaperBLAST's database that match '4.2.1.9' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

ilvD Q394_RS0106325 WP_028488534.1: dihydroxy-acid dehydratase is similar to:	PaperBLAST
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	75% id, 100% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	74% id, 100% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	74% id, 100% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	65% id, 99% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	34% id, 87% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	45% id, 63% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	41% id, 62% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	37% id, 63% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	36% id, 59% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	37% id, 57% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	35% id, 58% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	36% id, 56% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	48% id, 36% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	47% id, 34% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	45% id, 33% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	43% id, 33% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	46% id, 31% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	45% id, 32% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	41% id, 34% cov
More...

edd Q394_RS0103620 WP_028488076.1: phosphogluconate dehydratase is similar to:	PaperBLAST
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	33% id, 97% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	34% id, 92% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	33% id, 86% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	29% id, 98% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	30% id, 94% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	31% id, 91% cov
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	30% id, 93% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	29% id, 94% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	30% id, 87% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	31% id, 78% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	30% id, 83% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	32% id, 76% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory