Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

thrC Q394_RS0109360 WP_028489060.1: threonine synthase
is similar to:
PaperBLAST

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

68% id,
100% cov

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

56% id,
99% cov

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

42% id,
99% cov

More...

cysM Q394_RS0104390 WP_028488205.1: cysteine synthase CysM
is similar to:
PaperBLAST

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

29% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory