Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiothrix lacustris DSM 21227 (GCF_000621325.1)

Found 29 curated entries in PaperBLAST's database that match 'sorbitol dehydrogenase' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Thiothrix lacustris DSM 21227, or try another query

Q394_RS0109205 WP_028489032.1: SDR family oxidoreductase
is similar to:
PaperBLAST

5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase

79% id,
100% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

29% id,
91% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

29% id,
82% cov

More...

Q394_RS0117950 WP_028490463.1: pteridine reductase
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

36% id,
100% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

35% id,
100% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

35% id,
100% cov

More...

Q394_RS0118475 WP_211248857.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

36% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

36% id,
98% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

35% id,
98% cov

More...

fabG Q394_RS0114510 WP_038141668.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
100% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
99% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

28% id,
99% cov

Q394_RS0112895 WP_028489639.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

32% id,
97% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

30% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

28% id,
98% cov

More...

Q394_RS0112065 WP_038141396.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
98% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

25% id,
98% cov

Q394_RS0116370 WP_028490204.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
86% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

33% id,
82% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

35% id,
72% cov

More...

phbB Q394_RS0118415 WP_028490539.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

26% id,
98% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

25% id,
98% cov

More...

Q394_RS0108165 WP_028488848.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

24% id,
94% cov

5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase

26% id,
81% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
70% cov

More...

Q394_RS0103345 WP_028488026.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / AAA22508.1: sorbitol dehydrogenase from Bacillus subtilis

31% id,
71% cov

Q394_RS0107820 WP_028488787.1: methanol/ethanol family PQQ-dependent dehydrogenase
is similar to:
PaperBLAST

Q70JN9: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 1/2) (EC 1.1.99.21) from Gluconobacter oxydans

24% id,
80% cov

sldA / BAC02909.1: D-Sorbitol dehydrogenase from Gluconobacter oxydans

34% id,
12% cov

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

34% id,
12% cov

More...

Q394_RS0104545 WP_028488230.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

27% id,
71% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / AAA22508.1: sorbitol dehydrogenase from Bacillus subtilis

30% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory