Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacillus altitudinis 41KF2b (GCF_000691145.1)

Found 7 curated entries in PaperBLAST's database that match '1.1.3.2' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacillus altitudinis 41KF2b, or try another query

fni BA79_RS11720 BA79_11908 WP_035702903.1: type 2 isopentenyl-diphosphate Delta-isomerase
is similar to:
PaperBLAST

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

25% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory