Curated BLAST for Genomes

 

Curated BLAST

Searching in Weissella oryzae SG25 (GCF_000691805.2)

Found 10 curated entries in PaperBLAST's database that match '5.4.2.6' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Weissella oryzae SG25, or try another query

pgmB TT13_RS02545 WOSG25_030180 WP_027698533.1: beta-phosphoglucomutase
is similar to:
PaperBLAST

PGMB_LACLA / P71447: Beta-phosphoglucomutase; Beta-PGM; EC 5.4.2.6 from Lactococcus lactis
pgmB / P71447: β-phosphoglucomutase (EC 5.4.2.6) from Lactococcus lactis
P71447: beta-Phosphoglucomutase (EC 5.4.2.6) from Lactococcus lactis

42% id,
96% cov

PGMB_BACSU / O06995: Beta-phosphoglucomutase; Beta-PGM; EC 5.4.2.6 from Bacillus subtilis

41% id,
95% cov

PGMB_ECOLI / P77366: Beta-phosphoglucomutase; Beta-PGM; EC 5.4.2.6 from Escherichia coli
ycjU / P77366: β-phosphoglucomutase (EC 5.4.2.6) from Escherichia coli
P77366: beta-Phosphoglucomutase (EC 5.4.2.6) from Escherichia coli

39% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory