Searching in Thiomicrospira pelophila DSM 1534 (GCF_000711195.1)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Thiomicrospira pelophila DSM 1534, or try another query
lysA N746_RS0109595 WP_029936092.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 63% id, 99% cov |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 43% id, 99% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 42% id, 98% cov |
N746_RS0103890 WP_029934061.1: aspartate kinase is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 25% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
814700-815944 (frame +2) on NZ_JOMR01000001.1 Thiomicrospira pelophila DSM 1534 N746DRAFT_scf7180000000002_quiver_dupTrim_9340.1_C, whole genome shotgun sequence is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 25% id, 48% cov |
Lawrence Berkeley National Laboratory