Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenovibrio marinus DSM 11271 (GCF_000711315.1)

Found 16 curated entries in PaperBLAST's database that match '2.5.1.49' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hydrogenovibrio marinus DSM 11271, or try another query

P166_RS0105855 WP_029909757.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

Ga0059261_3194: O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) from Sphingomonas koreensis

 44% id,
95% cov

Q7M844: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Wolinella succinogenes

 34% id,
99% cov

Q187D4: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Clostridioides difficile

 31% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1168385-1169578 (frame -3) on NZ_JOML01000002.1 Hydrogenovibrio marinus DSM 11271 P166DRAFT_scf7180000000008_quiver.2_C, whole genome shotgun sequence
is similar to:		 PaperBLAST

Ga0059261_3194: O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) from Sphingomonas koreensis
Also see hits to annotated proteins above

 43% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory