Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenovibrio marinus DSM 11271 (GCF_000711315.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hydrogenovibrio marinus DSM 11271, or try another query

thrC P166_RS0104155 WP_029909039.1: threonine synthase
is similar to:
PaperBLAST

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

37% id,
92% cov

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

32% id,
97% cov

THRC_YEAST / P16120: Threonine synthase; TS; EC 4.2.3.1 from Saccharomyces cerevisiae
P16120: threonine synthase (EC 4.2.3.1) from Saccharomyces cerevisiae

31% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory