Searching in Algiphilus aromaticivorans DG1253 (GCF_000733765.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Algiphilus aromaticivorans DG1253, or try another query
| U743_RS17660 WP_043770361.1: homoserine kinase is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 45% id, 88% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 40% id, 97% cov |
| U743_RS15810 WP_043772522.1: shikimate kinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 32% id, 84% cov |
| ispE U743_RS05335 WP_052367564.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
thrB / Q58504: homoserine kinase monomer (EC 2.7.1.39) from Methanocaldococcus jannaschii | 24% id, 52% cov |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 27% id, 36% cov |
KHSE_ARATH / Q8L7R2: Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana | 34% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3391040-3391762 (frame +2) on NZ_JPOG01000001.1 Algiphilus aromaticivorans DG1253 U743DRAFT_scf7180000000006_quiver.1_C, whole genome shotgun sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 32% id, 90% cov |
Lawrence Berkeley National Laboratory