Curated BLAST for Genomes

 

Curated BLAST

Searching in Algiphilus aromaticivorans DG1253 (GCF_000733765.1)

Found 13 curated entries in PaperBLAST's database that match '4.1.2.19' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 28 relevant proteins in Algiphilus aromaticivorans DG1253, or try another query

U743_RS10670 WP_043768142.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

34% id,
41% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

31% id,
38% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

31% id,
37% cov

More...

U743_RS09980 WP_043771851.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

37% id,
38% cov

U743_RS06290 WP_043766495.1: SDR family oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

35% id,
38% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

35% id,
38% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

34% id,
38% cov

More...

U743_RS16410 WP_043769889.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

36% id,
37% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

35% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

35% id,
37% cov

More...

U743_RS03815 WP_043765634.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

35% id,
38% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

34% id,
38% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

34% id,
37% cov

More...

U743_RS03855 WP_043765651.1: SDR family oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

34% id,
38% cov

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

32% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

32% id,
37% cov

More...

fabG U743_RS06850 WP_043766696.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

34% id,
37% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

32% id,
37% cov

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

31% id,
37% cov

More...

U743_RS02130 WP_043770744.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

33% id,
37% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

33% id,
38% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

34% id,
27% cov

U743_RS04690 WP_043765903.1: SDR family oxidoreductase
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

31% id,
39% cov

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

29% id,
38% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

28% id,
38% cov

U743_RS02005 WP_043765146.1: SDR family oxidoreductase
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

34% id,
36% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

32% id,
36% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

31% id,
36% cov

More...

U743_RS16435 WP_043769901.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

31% id,
38% cov

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

30% id,
38% cov

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

27% id,
38% cov

More...

hcaB U743_RS02970 WP_232226709.1: 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

31% id,
37% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

30% id,
37% cov

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

28% id,
38% cov

More...

U743_RS00515 WP_043764687.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

32% id,
35% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

31% id,
35% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

31% id,
34% cov

More...

U743_RS16365 WP_043769872.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

30% id,
37% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

28% id,
38% cov

U743_RS00050 WP_043764561.1: SDR family oxidoreductase
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

26% id,
42% cov

U743_RS10060 WP_043767858.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

30% id,
36% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

29% id,
36% cov

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

31% id,
27% cov

More...

U743_RS03485 WP_043765538.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

29% id,
37% cov

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

30% id,
28% cov

U743_RS03775 WP_043765619.1: SDR family oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

28% id,
38% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

27% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

28% id,
30% cov

U743_RS03575 WP_232226713.1: SDR family oxidoreductase
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

28% id,
37% cov

U743_RS07240 WP_198021966.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

28% id,
37% cov

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

26% id,
29% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

42% id,
9% cov

U743_RS01990 WP_043765142.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

27% id,
37% cov

U743_RS13100 WP_043768866.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

37% id,
27% cov

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

27% id,
35% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

33% id,
27% cov

More...

U743_RS09995 WP_043767827.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

36% id,
25% cov

U743_RS11735 WP_052368018.1: SDR family oxidoreductase
is similar to:
PaperBLAST

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

29% id,
31% cov

U743_RS05665 WP_043766257.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae

26% id,
34% cov

U743_RS09945 WP_084191763.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

27% id,
32% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

29% id,
29% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

28% id,
30% cov

More...

U743_RS08150 WP_084191442.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

30% id,
26% cov

U743_RS03785 WP_052367492.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

35% id,
20% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

37% id,
16% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

37% id,
16% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

827803-828918 (frame -3) on NZ_JPOG01000001.1 Algiphilus aromaticivorans DG1253 U743DRAFT_scf7180000000006_quiver.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis
Also see hits to annotated proteins above

34% id,
40% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory