Curated BLAST for Genomes

 

Curated BLAST

Searching in Algiphilus aromaticivorans DG1253 (GCF_000733765.1)

Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Algiphilus aromaticivorans DG1253, or try another query

U743_RS02940 WP_043765396.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni

31% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory