Searching in Planktomarina temperata RCA23 (GCF_000738435.1)
Found 23 curated entries in PaperBLAST's database that match '4.3.1.18' as complete word(s).
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Planktomarina temperata RCA23, or try another query
RCA23_RS12505 RCA23_c24520 WP_044051560.1: D-cysteine desulfhydrase is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 41% id, 95% cov |
RCA23_RS10315 RCA23_c20180 WP_044050245.1: threonine/serine dehydratase is similar to: | PaperBLAST |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Schizosaccharomyces pombe | 39% id, 96% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 35% id, 98% cov |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 36% id, 94% cov |
RCA23_RS02360 RCA23_c04630 WP_044048880.1: threonine/serine dehydratase is similar to: | PaperBLAST |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Arabidopsis thaliana | 33% id, 92% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 30% id, 95% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 30% id, 93% cov |
ilvA RCA23_RS15620 RCA23_c30650 WP_044051092.1: threonine ammonia-lyase IlvA is similar to: | PaperBLAST |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Schizosaccharomyces pombe | 30% id, 95% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 27% id, 95% cov |
RCA23_RS06020 RCA23_c11780 WP_081870911.1: D-TA family PLP-dependent enzyme is similar to: | PaperBLAST |
DSD1_DICDI / Q54XE5: D-serine dehydratase; D-serine deaminase; EC 4.3.1.18 from Dictyostelium discoideum | 25% id, 96% cov |
DSD1_CHICK / A0A8V1ABE9: D-serine dehydratase; D-serine deaminase; EC 4.3.1.18 from Gallus gallus | 36% id, 42% cov |
DSD1_SCHPO / Q9US35: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Schizosaccharomyces pombe | 25% id, 43% cov |
RCA23_RS05540 RCA23_c10860 WP_044049470.1: cysteine synthase A is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 24% id, 61% cov |
Q4A041: D-Serine ammonia-lyase (EC 4.3.1.18) from Staphylococcus saprophyticus | 21% id, 67% cov |
PfGW456L13_3648: D-serine ammonia-lyase (EC 4.3.1.18) from Pseudomonas fluorescens | 24% id, 57% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2590776-2591867 (frame -1) on NZ_CP003984.1 Planktomarina temperata RCA23 chromosome, complete genome is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 40% id, 97% cov |
Lawrence Berkeley National Laboratory