Curated BLAST for Genomes

 

Curated BLAST

Searching in Secundilactobacillus oryzae JCM 18671 SG293 (GCF_000740055.1)

Found 64 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Secundilactobacillus oryzae JCM 18671 SG293, or try another query

deoD LOSG293_RS07905 LOSG293_310040 WP_034529054.1: purine-nucleoside phosphorylase
is similar to:
PaperBLAST

O34925: purine-nucleoside phosphorylase (EC 2.4.2.1) from Bacillus subtilis

62% id,
99% cov

deoD: purine nucleoside phosphorylase; EC 2.4.2.1 from Bacillus anthracis

61% id,
100% cov

P77835: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

59% id,
100% cov

More...

tpiA LOSG293_RS08160 LOSG293_340070 WP_034529178.1: triose-phosphate isomerase
is similar to:
PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

38% id,
97% cov

LOSG293_RS07900 LOSG293_310030 WP_034529052.1: phosphopentomutase
is similar to:
PaperBLAST

A0A518Y5Z2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori

40% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory