Curated BLAST for Genomes

 

Curated BLAST

Searching in Secundilactobacillus oryzae JCM 18671 SG293 (GCF_000740055.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Secundilactobacillus oryzae JCM 18671 SG293, or try another query

LOSG293_RS05510 LOSG293_170100 WP_034527995.1: acetate kinase
is similar to:
PaperBLAST

Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis

65% id,
99% cov

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

55% id,
100% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

53% id,
100% cov

More...

LOSG293_RS00980 LOSG293_020330 WP_034525942.1: acetate kinase
is similar to:
PaperBLAST

A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

53% id,
99% cov

Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis

53% id,
100% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

51% id,
99% cov

More...

LOSG293_RS00890 LOSG293_020140 WP_034525905.1: acetate/propionate family kinase
is similar to:
PaperBLAST

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

43% id,
100% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

41% id,
100% cov

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

42% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory