Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeacidiphilus oryzae TH49 (GCF_000744815.1)

Found 51 curated entries in PaperBLAST's database that match '5.4.2.2' as complete word(s).

These curated entries have 35 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Phaeacidiphilus oryzae TH49, or try another query

pgm BS73_RS30025 WP_037577608.1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
is similar to:
PaperBLAST

pgmA / I6Y2G3: phosphoglucomutase (EC 5.4.2.2) from Mycobacterium tuberculosis
I6Y2G3: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Mycobacterium tuberculosis

70% id,
100% cov

A0A0H3NJ17: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica
Q8ZQW9: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica

58% id,
99% cov

PGM_ECOLI / P36938: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Escherichia coli
Blu / b0688: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli
pgm / GB|ABB65241.1: phosphoglucomutase; EC 5.4.2.2 from Escherichia coli
pgm / P36938: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli

58% id,
99% cov

More...

BS73_RS09785 WP_051939761.1: phosphomannomutase/phosphoglucomutase
is similar to:
PaperBLAST

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri

44% id,
98% cov

ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa
algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa

35% id,
93% cov

M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens

32% id,
94% cov

More...

BS73_RS24040 WP_037575791.1: phosphomannomutase/phosphoglucomutase
is similar to:
PaperBLAST

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri

42% id,
98% cov

ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa
algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa

34% id,
94% cov

PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis

29% id,
96% cov

More...

BS73_RS23610 WP_037575617.1: phospho-sugar mutase
is similar to:
PaperBLAST

C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii

36% id,
95% cov

PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis
pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis

34% id,
91% cov

PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens
PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens

35% id,
88% cov

More...

glmM BS73_RS22910 WP_037575401.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis

35% id,
97% cov

Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus

31% id,
100% cov

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri

30% id,
98% cov

More...

BS73_RS00180 WP_037568366.1: mannose-1-phosphate guanyltransferase
is similar to:
PaperBLAST

PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis

27% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory