Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeacidiphilus oryzae TH49 (GCF_000744815.1)

Found 20 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Phaeacidiphilus oryzae TH49, or try another query

BS73_RS23610 WP_037575617.1: phospho-sugar mutase
is similar to:
PaperBLAST

PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens
PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens

35% id,
88% cov

PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe

33% id,
92% cov

PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus

34% id,
90% cov

More...

BS73_RS09785 WP_051939761.1: phosphomannomutase/phosphoglucomutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

31% id,
95% cov

PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe

37% id,
15% cov

glmM BS73_RS22910 WP_037575401.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

31% id,
94% cov

PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus

23% id,
49% cov

PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens
PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens

23% id,
49% cov

More...

BS73_RS24040 WP_037575791.1: phosphomannomutase/phosphoglucomutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

29% id,
65% cov

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

36% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory