Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeacidiphilus oryzae TH49 (GCF_000744815.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Phaeacidiphilus oryzae TH49, or try another query

BS73_RS14735 WP_037572586.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

68% id,
95% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

45% id,
99% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

43% id,
96% cov

More...

gcl BS73_RS29625 WP_037577557.1: glyoxylate carboligase
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

35% id,
94% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

33% id,
95% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

35% id,
85% cov

More...

BS73_RS31390 WP_084704496.1: thiamine pyrophosphate-dependent enzyme
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

32% id,
95% cov

ILVG_MYCTU / P9WG39: Acetolactate synthase large subunit IlvG; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
96% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

35% id,
48% cov

More...

BS73_RS27900 WP_037577100.1: thiamine pyrophosphate-requiring protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

31% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

31% id,
94% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

29% id,
93% cov

More...

BS73_RS25220 WP_037576212.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVB2_MYCTU / O06335: Putative acetolactate synthase large subunit IlvB2; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

30% id,
98% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

30% id,
99% cov

ILVG_MYCTU / P9WG39: Acetolactate synthase large subunit IlvG; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
95% cov

More...

oxc BS73_RS32440 WP_051941247.1: oxalyl-CoA decarboxylase
is similar to:
PaperBLAST

ILVG_MYCTU / P9WG39: Acetolactate synthase large subunit IlvG; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

30% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

26% id,
93% cov

BS73_RS33600 WP_037582416.1: pyruvate dehydrogenase
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

30% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

30% id,
93% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

30% id,
92% cov

More...

BS73_RS10485 WP_037579002.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVB2_MYCTU / O06335: Putative acetolactate synthase large subunit IlvB2; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

27% id,
98% cov

ILVG_MYCTU / P9WG39: Acetolactate synthase large subunit IlvG; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
85% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

26% id,
83% cov

More...

iolD BS73_RS11410 WP_037571522.1: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
94% cov

ILVB2_MYCTU / O06335: Putative acetolactate synthase large subunit IlvB2; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

28% id,
90% cov

ILVG_MYCTU / P9WG39: Acetolactate synthase large subunit IlvG; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
96% cov

More...

BS73_RS33080 WP_037578033.1: thiamine pyrophosphate-dependent enzyme
is similar to:
PaperBLAST

ILVB2_MYCTU / O06335: Putative acetolactate synthase large subunit IlvB2; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

25% id,
99% cov

BS73_RS07300 WP_051939650.1: thiamine pyrophosphate-requiring protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

25% id,
95% cov

ILVX_MYCTU / O53554: Putative acetolactate synthase large subunit IlvX; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2440583-2442604 (frame -2) on NZ_JQMQ01000005.1 Phaeacidiphilus oryzae TH49 BS73DRAFT_unitig_14_quiver.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

65% id,
99% cov

5816590-5819046 (frame +1) on NZ_JQMQ01000005.1 Phaeacidiphilus oryzae TH49 BS73DRAFT_unitig_14_quiver.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

35% id,
97% cov

1592997-1595918 (frame +3) on NZ_JQMQ01000005.1 Phaeacidiphilus oryzae TH49 BS73DRAFT_unitig_14_quiver.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

28% id,
98% cov

4868954-4873000 (frame +2) on NZ_JQMQ01000005.1 Phaeacidiphilus oryzae TH49 BS73DRAFT_unitig_14_quiver.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

30% id,
75% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory