Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeacidiphilus oryzae TH49 (GCF_000744815.1)

Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%beta' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phaeacidiphilus oryzae TH49, or try another query

BS73_RS05100 WP_063837127.1: xanthine dehydrogenase family protein molybdopterin-binding subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

30% id,
22% cov

BS73_RS06280 WP_037570336.1: xanthine dehydrogenase family protein molybdopterin-binding subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

34% id,
18% cov

BS73_RS08335 WP_051939703.1: xanthine dehydrogenase family protein molybdopterin-binding subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

30% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory