Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia mobilis UQM 1969 (GCF_000745425.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Beijerinckia mobilis UQM 1969, or try another query

glmS DL88_RS14190 WP_034997263.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
23% cov

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

31% id,
14% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

36% id,
12% cov

purF DL88_RS11720 WP_034996312.1: amidophosphoribosyltransferase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory