Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia mobilis UQM 1969 (GCF_000745425.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Beijerinckia mobilis UQM 1969, or try another query

DL88_RS09215 WP_034995003.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

60% id,
96% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

55% id,
96% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

45% id,
100% cov

DL88_RS14850 WP_034997599.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

49% id,
100% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

48% id,
98% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

39% id,
99% cov

carA DL88_RS18395 WP_034999742.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

32% id,
89% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory