Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium veterum MK4 (GCF_000745485.1)

Found 23 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Methanobacterium veterum MK4, or try another query

ercA EJ01_RS11120 WP_048082914.1: alcohol dehydrogenase-like regulatory protein ErcA
is similar to:
PaperBLAST

YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
yiaY / P37686: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli

39% id,
100% cov

EJ01_RS05805 WP_269221192.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

28% id,
91% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

28% id,
91% cov

TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis
Q5JI69: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis

27% id,
70% cov

More...

EJ01_RS14715 WP_048082475.1: SDR family oxidoreductase
is similar to:
PaperBLAST

E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii

23% id,
99% cov

EJ01_RS01405 WP_048080142.1: glutathione-independent formaldehyde dehydrogenase
is similar to:
PaperBLAST

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

28% id,
79% cov

O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis

27% id,
80% cov

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

30% id,
72% cov

More...

EJ01_RS15955 WP_048082698.1: SDR family oxidoreductase
is similar to:
PaperBLAST

D6PBM7: L-threonine 3-dehydrogenase (EC 1.1.1.103) from uncultured archaeon

28% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory