Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium veterum MK4 (GCF_000745485.1)

Found 41 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Methanobacterium veterum MK4, or try another query

EJ01_RS03845 WP_048082005.1: branched-chain amino acid transaminase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

51% id,
100% cov

EJ01_RS01820 WP_048080217.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

49% id,
97% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

47% id,
97% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

39% id,
96% cov

More...

EJ01_RS01800 WP_048080213.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

44% id,
95% cov

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

37% id,
99% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

27% id,
98% cov

More...

hisC EJ01_RS02120 WP_048080272.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

35% id,
96% cov

PATR_CORGL / Q8NTT4: Aromatic amino acid aminotransferase; ArAT; Phenylalanine aminotransferase; EC 2.6.1.57 from Corynebacterium glutamicum

29% id,
97% cov

PATR_MYCTU / P9WML5: Aromatic amino acid aminotransferase; ArAT; Phenylalanine aminotransferase; EC 2.6.1.57 from Mycobacterium tuberculosis

27% id,
97% cov

More...

EJ01_RS00430 WP_048079966.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

31% id,
91% cov

PATR_CORGL / Q8NTT4: Aromatic amino acid aminotransferase; ArAT; Phenylalanine aminotransferase; EC 2.6.1.57 from Corynebacterium glutamicum

24% id,
77% cov

EJ01_RS00795 WP_048080035.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

PATR_MYCTU / P9WML5: Aromatic amino acid aminotransferase; ArAT; Phenylalanine aminotransferase; EC 2.6.1.57 from Mycobacterium tuberculosis

23% id,
88% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

22% id,
84% cov

PATR_CORGL / Q8NTT4: Aromatic amino acid aminotransferase; ArAT; Phenylalanine aminotransferase; EC 2.6.1.57 from Corynebacterium glutamicum

25% id,
74% cov

mfnA EJ01_RS08140 WP_084689182.1: tyrosine decarboxylase MfnA
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

23% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

335130-336320 (frame -2) on NZ_JQJK01000008.1 Methanobacterium veterum strain MK4 EJ01DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis
Also see hits to annotated proteins above

43% id,
96% cov

AATR3_SCHPO / Q9Y7S6: Aromatic amino acid aminotransferase C569.07; EC 2.6.1.57 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

26% id,
98% cov

AATR1_SCHPO / O14192: Aromatic amino acid aminotransferase C56E4.03; EC 2.6.1.57 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

25% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory