Curated BLAST for Genomes

 

Curated BLAST

Searching in Xenophilus azovorans DSM 13620 (GCF_000745855.1)

Found 42 curated entries in PaperBLAST's database that match '1.1.1.95' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Xenophilus azovorans DSM 13620, or try another query

serA Q392_RS15870 WP_038209742.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

76% id,
100% cov

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri

75% id,
87% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

61% id,
100% cov

More...

Q392_RS15885 WP_038209746.1: FAD/FMN-binding oxidoreductase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

76% id,
49% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

70% id,
49% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

70% id,
48% cov

More...

Q392_RS32360 WP_011517523.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

34% id,
94% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

25% id,
96% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

28% id,
77% cov

More...

Q392_RS21785 WP_038212292.1: D-glycerate dehydrogenase
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

30% id,
94% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

39% id,
58% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

33% id,
57% cov

More...

Q392_RS18915 WP_038210988.1: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

32% id,
88% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

32% id,
58% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

32% id,
58% cov

More...

Q392_RS19260 WP_038211125.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

31% id,
87% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

29% id,
86% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

33% id,
70% cov

More...

Q392_RS06765 WP_038203401.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

29% id,
92% cov

Q392_RS24070 WP_038213769.1: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

30% id,
86% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

31% id,
78% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

28% id,
82% cov

More...

Q392_RS14920 WP_038209204.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

31% id,
83% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

30% id,
84% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

29% id,
73% cov

More...

Q392_RS12045 WP_245610704.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

31% id,
83% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

32% id,
80% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

34% id,
71% cov

More...

Q392_RS27330 WP_038216175.1: glyoxylate/hydroxypyruvate reductase A
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

29% id,
87% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

27% id,
59% cov

serA / GB|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis

28% id,
50% cov

More...

Q392_RS12145 WP_169748304.1: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

34% id,
73% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

33% id,
57% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

29% id,
65% cov

More...

Q392_RS12390 WP_038207325.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

30% id,
81% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

31% id,
77% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

39% id,
58% cov

More...

Q392_RS28390 WP_051954072.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

26% id,
91% cov

Q392_RS15160 WP_038209355.1: D-glycerate dehydrogenase
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

33% id,
70% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

38% id,
56% cov

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri

30% id,
69% cov

More...

Q392_RS10625 WP_038206174.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

29% id,
61% cov

Q392_RS23235 WP_038213161.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

32% id,
13% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

34% id,
11% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

32% id,
6% cov

More...

Q392_RS23535 WP_038213345.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

32% id,
12% cov

Q392_RS29355 WP_245610865.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

29% id,
14% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

27% id,
14% cov

Q392_RS05455 WP_038202544.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

33% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

29912-32431 (frame +2) on NZ_JQKD01000025.1 Xenophilus azovorans DSM 13620 Q392DRAFT_scaffold00022.22_C, whole genome shotgun sequence
is similar to:
PaperBLAST

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri
Also see hits to annotated proteins above

30% id,
78% cov

96913-98070 (frame +1) on NZ_JQKD01000016.1 Xenophilus azovorans DSM 13620 Q392DRAFT_scaffold00013.13_C, whole genome shotgun sequence
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori
Also see hits to annotated proteins above

28% id,
64% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory