Curated BLAST for Genomes

 

Curated BLAST

Searching in Xenophilus azovorans DSM 13620 (GCF_000745855.1)

Found 20 curated entries in PaperBLAST's database that match '1.13.11.5' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Xenophilus azovorans DSM 13620, or try another query

hmgA Q392_RS01240 WP_038200418.1: homogentisate 1,2-dioxygenase
is similar to:
PaperBLAST

PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

59% id,
98% cov

HGD_PSEPU / Q6EMI9: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida

58% id,
99% cov

AO353_15550: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

58% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory