Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfobacter vibrioformis DSM 8776 (GCF_000745975.1)

Found 13 curated entries in PaperBLAST's database that match '1.1.1.203' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfobacter vibrioformis DSM 8776, or try another query

Q366_RS06955 WP_035237577.1: NAD-dependent epimerase
is similar to:
PaperBLAST

URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae
udh / Q888H1: uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae
Q888H1: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae

29% id,
64% cov

Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens

28% id,
66% cov

PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae

28% id,
58% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory