Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfobacter vibrioformis DSM 8776 (GCF_000745975.1)

Found 55 curated entries in PaperBLAST's database that match '1.1.1.35' as complete word(s).

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Desulfobacter vibrioformis DSM 8776, or try another query

Q366_RS00395 WP_035235311.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

hbd / P52041: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium acetobutylicum

74% id,
99% cov

hbd / Q8RMI3: 3-hydroxybutyryl-CoA dehydrogenase subunit (EC 1.1.1.35) from Clostridium beijerinckii

73% id,
99% cov

C4IEM5: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium butyricum

72% id,
99% cov

More...

Q366_RS09300 WP_035238342.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

C4IEM5: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium butyricum

60% id,
100% cov

hbd / P52041: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium acetobutylicum

59% id,
100% cov

hbd / Q8RMI3: 3-hydroxybutyryl-CoA dehydrogenase subunit (EC 1.1.1.35) from Clostridium beijerinckii

57% id,
100% cov

More...

Q366_RS14800 WP_035240372.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

hbd / P52041: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium acetobutylicum

58% id,
100% cov

hbd / Q8RMI3: 3-hydroxybutyryl-CoA dehydrogenase subunit (EC 1.1.1.35) from Clostridium beijerinckii

58% id,
100% cov

C4IEM5: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Clostridium butyricum

57% id,
100% cov

More...

Q366_RS00865 WP_035235476.1: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

FADN_BACSU / O32178: Probable 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Bacillus subtilis

44% id,
100% cov

Q0KEG0: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

37% id,
99% cov

mdpX / A2SP28: (S)-3-hydroxybutanoyl-CoA dehydrogeanse (EC 1.1.1.35) from Methylibium petroleiphilum

34% id,
96% cov

More...

fabG Q366_RS09470 WP_035238407.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxyacyl-CoA dehydrogenase type II; Hydroxysteroid dehydrogenase; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.62; EC 1.1.1.-; EC 1.1.1.53 from Drosophila melanogaster

31% id,
98% cov

HCD2_HUMAN / Q99714: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Homo sapiens
HSD17B10 / Q99714: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase subunit (EC 1.1.1.35; EC 1.1.1.178; EC 1.1.1.239) from Homo sapiens

31% id,
94% cov

HCD2_MOUSE / O08756: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Mus musculus

30% id,
94% cov

More...

Q366_RS02280 WP_035235924.1: SDR family oxidoreductase
is similar to:
PaperBLAST

HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxyacyl-CoA dehydrogenase type II; Hydroxysteroid dehydrogenase; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.62; EC 1.1.1.-; EC 1.1.1.53 from Drosophila melanogaster

30% id,
98% cov

MFEA_DICDI / Q9NKW1: Peroxisomal multifunctional enzyme A; MFE-A; MFE-1; EC 1.1.1.35 from Dictyostelium discoideum

33% id,
44% cov

Q366_RS15080 WP_211251904.1: oxidoreductase
is similar to:
PaperBLAST

HCD2_MOUSE / O08756: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Mus musculus

29% id,
91% cov

HCD2_HUMAN / Q99714: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Homo sapiens
HSD17B10 / Q99714: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase subunit (EC 1.1.1.35; EC 1.1.1.178; EC 1.1.1.239) from Homo sapiens

26% id,
96% cov

HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxyacyl-CoA dehydrogenase type II; Hydroxysteroid dehydrogenase; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.62; EC 1.1.1.-; EC 1.1.1.53 from Drosophila melanogaster

29% id,
76% cov

More...

Q366_RS02355 WP_035235943.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

HCD2_HUMAN / Q99714: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Homo sapiens
HSD17B10 / Q99714: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase subunit (EC 1.1.1.35; EC 1.1.1.178; EC 1.1.1.239) from Homo sapiens

27% id,
95% cov

HCD2_MOUSE / O08756: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Mus musculus

27% id,
95% cov

Q366_RS18135 WP_035241898.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

41% id,
39% cov

D3RXI4: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus

41% id,
38% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

39% id,
31% cov

More...

Q366_RS07650 WP_035237801.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

33% id,
39% cov

H281DRAFT_00361: (3S)-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) / enoyl-CoA hydratase domain from Paraburkholderia bryophila

32% id,
27% cov

FADJ_ECOLI / P77399: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 1.1.1.35 from Escherichia coli
FadJ / b2341: 3-hydroxyacyl-CoA dehydrogenase FadJ (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli
fadJ / RF|NP_416843: fatty acid oxidation complex subunit alpha; EC 1.1.1.35; EC 4.2.1.17; EC 5.1.2.3 from Escherichia coli
fadJ / P77399: multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxyacyl-CoA epimerase/enoyl-CoA hydratase FadJ (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli

32% id,
27% cov

More...

menB Q366_RS13010 WP_035239607.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

34% id,
37% cov

D3RXI4: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus

32% id,
37% cov

Shewana3_0024: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella sp.

27% id,
30% cov

More...

trkA Q366_RS14600 WP_035240317.1: Trk system potassium transporter TrkA
is similar to:
PaperBLAST

AIM1_ARATH / Q9ZPI6: Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1; Protein ABNORMAL INFLORESCENCE MERISTEM 1; AtAIM1; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Arabidopsis thaliana
AIM1 / Q9ZPI6: peroxisomal fatty acid β-oxidation multifunctional protein AIM1 (EC 1.1.1.35; EC 4.2.1.17) from Arabidopsis thaliana

22% id,
48% cov

Q366_RS02685 WP_035236052.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

D3RXI4: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus

27% id,
33% cov

HADHA / P40939: mitochondrial trifunctional enzyme α subunit (EC 1.1.1.35; EC 4.2.1.17; EC 1.1.1.211) from Homo sapiens

27% id,
27% cov

FADB_ECOLI / P21177: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Escherichia coli
OldB / b3846: multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli
fadB / P21177: multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli

25% id,
26% cov

Q366_RS05940 WP_035237235.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

22% id,
27% cov

D3RXI4: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus

26% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory